CPC:轉錄本蛋白編碼潛能預測工具

 

 

CPC是由北京大學開發的一款lncRNA預測工具，

 

只需要輸入fasta格式的轉錄本序列，

 

該軟件就可以 判斷每條轉錄本的蛋白編碼潛能並進行打分，

 

根據得分將轉錄本划分為coding和non-coding兩類，網址如下

http://cpc2.cbi.pku.edu.cn/

 

 

Coding Potential Calculator (CPC) is a Support Vector Machine-based classifier to assess the protein-coding potential of a transcript (i.e whether a cDNA/RNA transcript could encode a peptide or not) based on six biologically meaningful sequence features.

 

It takes nucleotide FASTA sequences as input, and generate output about the coding status and the "supporting evidence" for the sequence.

 

 

 

 

參考來源：

https://www.jianshu.com/p/18dd09c542eb

https://github.com/biocoder/cpc