常用熒光染料的激發波長和發射波長:
| 熒光染料 Fluorescent Dye |
激發波長（nm） Excitation |
發射波長（nm） Emission |
| Cy2 |
489 |
506 |
| GFP(Red Shifted) |
488 |
507 |
| YO-PRO-1 |
491 |
509 |
| YOYO-1 |
491 |
509 |
| Calcein |
494 |
517 |
| FITC |
494 |
518 |
| FluorX |
494 |
519 |
| Alexa 488 |
490 |
520 |
| Rhodamine 110 |
496 |
520 |
| ABI,5-FAM |
494 |
522 |
| Oregon Green 500 |
503 |
522 |
| Oregon Green 488 |
496 |
524 |
| Rlbo Green |
500 |
525 |
| Rhodamine Green |
502 |
527 |
| Rhodamine 123 |
507 |
529 |
| Magnesium Green |
506 |
531 |
| Calcium Green |
506 |
533 |
| TO-PRO-1 |
514 |
533 |
| TOTO-1 |
514 |
533 |
| ABI,JOE |
520 |
548 |
| BODIPY 530/550 |
530 |
550 |
| Dil |
549 |
565 |
| BODIPY R |
542 |
568 |
| BODIPY 558/568 |
558 |
568 |
| BODIPY 564/570 |
564 |
570 |
| Cy3 |
550 |
570 |
| Alexa 546 |
555 |
570 |
| TRITC |
547 |
572 |
| Magnesium Orange |
550 |
575 |
| Phycoerythrin, R&B |
565 |
575 |
| Rhodamine Phalloidin |
550 |
575 |
| Calcium Orange |
549 |
576 |
| Pyronin Y |
555 |
580 |
| Rhodamine B |
555 |
580 |
| ABI,TAMRA |
560 |
582 |
| Rhodamine Red |
570 |
590 |
| Cy3.5 |
581 |
596 |
| ABI,ROX |
588 |
608 |
| Calcium Crimson |
590 |
615 |
| Alexa 594 |
590 |
615 |
| Texas Red |
595 |
615 |
| Nile Red |
549 |
628 |
| YO-PRO-3 |
612 |
631 |
| YOYO-3 |
612 |
631 |
| R-Phycocyanin |
618 |
642 |
| C-Phycocyanin |
620 |
648 |
| TO-PRO-3 |
642 |
660 |
| TOTO-3 |
642 |
660 |
| DiD DilC’(5) |
644 |
665 |
| Cy5 |
649 |
670 |
| Thiadicarbocyanine |
651 |
671 |
| Cy5.5 |
675 |
694 |