HISAT2 下载和使用

HISAT2官网
https://daehwankimlab.github.io/hisat2/

HISAT2 下载

https://daehwankimlab.github.io/hisat2/download/

 

Binaries

Version: HISAT2 2.2.1

Release Date: 7/24/2020
Source	https://cloud.biohpc.swmed.edu/index.php/s/fE9QCsX3NH4QwBi/download
OSX_x86_64	https://cloud.biohpc.swmed.edu/index.php/s/zMgEtnF6LjnjFrr/download
Linux_x86_64	https://cloud.biohpc.swmed.edu/index.php/s/oTtGWbWjaxsQ2Ho/download

Version: HISAT2 2.2.0

Release Date: 2/6/2020
Source	https://cloud.biohpc.swmed.edu/index.php/s/hisat2-220-source/download
OSX_x86_64	https://cloud.biohpc.swmed.edu/index.php/s/hisat2-220-OSX_x86_64/download
Linux_x86_64	https://cloud.biohpc.swmed.edu/index.php/s/hisat2-220-Linux_x86_64/download

Version: HISAT2 2.1.0

Release Date: 6/8/2017
Source	https://cloud.biohpc.swmed.edu/index.php/s/hisat2-210-source/download
OSX_x86_64	https://cloud.biohpc.swmed.edu/index.php/s/hisat2-210-OSX_x86_64/download
Linux_x86_64	https://cloud.biohpc.swmed.edu/index.php/s/hisat2-210-Linux_x86_64/download
Windows	http://www.di.fc.ul.pt/~afalcao/hisat2_windows.html

 

Linux 上的下载和解压：

wget https://cloud.biohpc.swmed.edu/index.php/s/oTtGWbWjaxsQ2Ho/download

mv download hisat2-2.2.1-Linux_x86_64.zip

unzip hisat2-2.2.1-Linux_x86_64.zip

cd hisat2-2.2.1/


错误：
hisat2-build: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by hisat2-build)
hisat2-build: /lib64/libstdc++.so.6: version `CXXABI_1.3.8' not found (required by hisat2-build)
hisat2-build: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by hisat2-build)