步驟如下：
一、編譯安裝兩個mysql，步驟如下
下載Mysql ，此處以Mysql-6.0.11-alpha.tar.gz 為例
安裝第一個數據庫(主數據庫)
(紅色部分為默認數據庫文件路徑，可改成其他如：data、var等)
tar zxvf mysql-6.0.11-alpha.tar.gz
cd mysql-6.0.11-alpha
./configure --prefix=/usr/local/mysql3306 --sysconfdir=/usr/local/mysql/etc --with-tcp-port=3306 --localstatedir=/usr/local/mysql3306/var--with-unix-socket-path=/tmp/mysql3306.sock --with-charset=utf8 --with-collation=utf8_general_ci --with-extra-charsets=gbk,gb2312,binary --enable-thread-safe-client --with-plugins=innobase --with-mysqld-user=mysql --with-charset=utf8 --with-client-ldflags=-all-static --with-mysqld-ldflags=-all-static
make && make install
安裝第二個數據庫(從數據庫)
tar zxvf mysql-6.0.11-alpha.tar.gz
cd mysql-6.0.11-alpha
./configure --prefix=/usr/local/mysql3307 --sysconfdir=/usr/local/mysql3307/etc --with-tcp-port=3307 --localstatedir=/usr/local/mysql3307/var--with-unix-socket-path=/tmp/mysql3307.sock --with-charset=utf8 --with-collation=utf8_general_ci --with-extra-charsets=gbk,gb2312,binary --enable-thread-safe-client --with-plugins=innobase --with-mysqld-user=mysql --with-charset=utf8 --with-client-ldflags=-all-static --with-mysqld-ldflags=-all-static
make && make install
如需支持所有字符集 修改為：--with-extra-charsets=all 即可
二、分別初始化數據庫腳本（在編譯目錄執行下）
scripts/mysql_install_db --basedir=/usr/local/mysql3306/ --user=mysql
scripts/mysql_install_db --basedir=/usr/local/mysql3307/ --user=mysql
注：可用--datadir=PATH參數指定數據庫文件路徑，默認為編譯時-- localstatedir
三、修改從庫配置文件
拷貝配置文件：
cp /usr/local/software/mysql-6.0.11-alpha/support-files/my-medium.cnf /usr/local/mysql/etc/my.cnf
cp /usr/local/software/mysql-6.0.11-alpha/support-files/my-medium.cnf /usr/local/mysql3307/etc/my.cnf
四、修改各個數據庫的my.cnf文件
主要內容如下：
添加InnoDB支持：
[client]
#password = your_password
port = 3307 --數據庫端口號
socket = /tmp/mysqls.sock --sock文件路徑
default-character-set=utf8 --客戶端UTF8連接
[mysqld]
port = 3307 --數據庫端口號
socket = /tmp/mysqls.sock --sock文件路徑
default-storage-engine=INNODB
default-character-set=UTF8 --默認字符集
init_connect='SET NAMES utf8' --以UTF8連接
skip-name-resolve --取消DNS反向解析
lower_case_table_names=1 --不區分表名大小寫
啟動數據庫（進入各自目錄）
主：./scripts/mysqld_safe &
從：./scripts/mysqld_safe &
配置開啟自動：
cp /usr/local/software/mysql-6.0.11-alpha/support-files/mysql.server /etc/init.d/mysql
cp /usr/local/software/mysql-6.0.11-alpha/support-files/mysql.server /etc/init.d/mysql3307
修改/etc/init.d/mysql3007中basedir與datadir為即可
basedir=/usr/local/mysql3307
datadir=/usr/local/mysql3307/var
停止數據庫
主：./mysqladmin shutdown
從：./mysqladmin shutdown